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Align REBASE::M2.Mma5219I to PF01170 (UPF0020)

REBASE::M2.Mma5219I has 499 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence            Description
    ------- ------ -----    ------- ------ -----   ---- --  --------            -----------
    6.6e-13   34.9   0.1    2.6e-12   32.9   0.0    2.0  2  REBASE::M2.Mma5219I  


Domain annotation for each sequence (and alignments):
>> REBASE::M2.Mma5219I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   32.9   0.0   2.6e-12   2.6e-12      18     132 ..     182     283 ..     176     287 .. 0.83
   2 ?   -2.4   0.0      0.18      0.18      87     116 ..     400     428 ..     345     461 .. 0.59

  Alignments for each domain:
  == domain 1  score: 32.9 bits;  conditional E-value: 2.6e-12
                          HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEE CS
              UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlief 107
                          + +  + + k ge+++DP CGsG++l+ aall+++                   ++ +++klyg +++    + ar N    g +d+  +
  REBASE::M2.Mma5219I 182 RLMSLIVDPKSGESIYDPTCGSGGMLLNAALLAKEKG-----------------QEYRNIKLYGQEINIITSAIARMNMFLHGFEDFYVI 254
                          567778899************************9998.................4557899*************************9988 PP

                          EE--GGG--....STTS---EEEE----- CS
              UPF0020 108 sqadaakLr....lkegevdvivtnpPYG 132
                          +     +       + +++d++++npPY 
  REBASE::M2.Mma5219I 255 RGDTLSNPAfvedDRVKKFDIVIANPPYS 283
                          864443322444545559**********6 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.18
                          HHHHHHHHHHHHTT-GGGEEEEE--GGG-- CS
              UPF0020  87 rvvqgareNaekagvgdliefsqadaakLr 116
                            +++++ ++e+  +++ i++   d+++++
  REBASE::M2.Mma5219I 400 ISINTTQAKLESEHIDK-IHAAYSDFKSIE 428
                          33444444444444433.333333555444 PP



Or compare REBASE::M2.Mma5219I to CDD or PaperBLAST