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Align REBASE::M2.Pae95I to PF01170 (UPF0020)

REBASE::M2.Pae95I has 507 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    4.4e-11   29.0   0.0    2.5e-10   26.5   0.0    2.2  2  REBASE::M2.Pae95I  


Domain annotation for each sequence (and alignments):
>> REBASE::M2.Pae95I  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.0      0.22      0.22      98     136 ..      88     127 ..      66     147 .. 0.64
   2 !   26.5   0.0   2.5e-10   2.5e-10      19     133 ..     186     287 ..     179     296 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.22
                        HTT-GGGEEEEE--GGG--.STTS---EEEE--------- CS
            UPF0020  98 kagvgdliefsqadaakLr.lkegevdvivtnpPYGerlg 136
                        + +  +  ++ q  +++++ ++ +  d i ++ P+ +r  
  REBASE::M2.Pae95I  88 RQTPRNVGAAIQRAMRAIEsANPDMLDGIFGDAPWTNRDR 127
                        5555555555555666666433346788888999887754 PP

  == domain 2  score: 26.5 bits;  conditional E-value: 2.5e-10
                        HHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE. CS
            UPF0020  19 alvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsq. 109
                         + +l   + ge+++DP CG+G++lI  al + ++  g +                ++lklyg + +      ar N+   gv+d+  ++  
  REBASE::M2.Pae95I 186 LMTQLLAPQVGESIYDPTCGTGGMLIS-ALDEVKRSGGEY----------------RTLKLYGQERNLITSSIARMNLFLHGVEDFEIVRGd 260
                        57888899******************6.566667775555................7899*************************9877651 PP

                        ..--GGG--.STTS---EEEE------ CS
            UPF0020 110 ..adaakLr.lkegevdvivtnpPYGe 133
                          ad ++++  +  ++dvi++npPY +
  REBASE::M2.Pae95I 261 tlADPKHIEdDRLRQFDVILANPPYSI 287
                        224555566633349**********76 PP



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