REBASE::M2.Pap126I has 503 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-10 27.6 0.0 4.7e-10 25.6 0.0 2.0 1 REBASE::M2.Pap126I
Domain annotation for each sequence (and alignments):
>> REBASE::M2.Pap126I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.6 0.0 4.7e-10 4.7e-10 19 133 .. 182 283 .. 175 292 .. 0.79
Alignments for each domain:
== domain 1 score: 25.6 bits; conditional E-value: 4.7e-10
UPF0020 19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsq 109
+ +l ++ge+++DP CG+G++lI al + ++ g + ++lklyg + + ar N+ gv+d+ ++
REBASE::M2.Pap126I 182 LMTQLLAPQAGESIYDPTCGTGGMLIS-ALDEVKRSGGEY----------------RTLKLYGQERNLITSSIARMNLFLHGVEDFEIIRG 255
57888899******************6.566666664555................7899*************************987776 PP
UPF0020 110 adaakLr....lkegevdvivtnpPYGe 133
a+ + + ++dvi++npPY +
REBASE::M2.Pap126I 256 DTLAEPKhiegDRLRQFDVILANPPYSI 283
4444333344633448**********76 PP
Or compare REBASE::M2.Pap126I to CDD or PaperBLAST