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Align SwissProt::P97770 to PF01170 (UPF0020)

SwissProt::P97770 has 505 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    3.3e-60  189.3   0.0    5.4e-60  188.6   0.0    1.3  1  SwissProt::P97770  


Domain annotation for each sequence (and alignments):
>> SwissProt::P97770  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.6   0.0   5.4e-60   5.4e-60       2     196 ..     296     479 ..     294     480 .. 0.96

  Alignments for each domain:
  == domain 1  score: 188.6 bits;  conditional E-value: 5.4e-60
                        SSS-SS---SS-HHHHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHH CS
            UPF0020   2 gyRefngpapLketLAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgar 93 
                        ++++f gp++L++tLA++++rl++ kp+++++DPmCG+G+i+IE+a+ ++++++++              ++++ + +++++++++++++++
  SwissProt::P97770 296 NITHF-GPTTLRSTLAYGMLRLCEPKPTDVIVDPMCGTGAIPIEGATEWSHCYHIAG-------------DNNPLAVNRAANNISSLLTKSQ 373
                        55555.5**********************************************7665.............8999999*************** PP

                        HHHHHTT-GGGEEEEE--GGG--STTS---EEEE----------HHHHHHHHHHHHHHHHHH-TT...-EEEEEESSHHHHHCC---..ESE CS
            UPF0020  94 eNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgg.grlvlltsenkalekaleer..alr 182
                         ++ k+++g  i+++q+d+++L+l++++vd+ivt++P+G+r+gskk++++LY+++lre++rv+r g gr+vllt+++k+++kal+ +   +r
  SwissProt::P97770 374 IKDGKTTWGLPIDAVQWDICNLPLRTASVDIIVTDMPFGKRMGSKKRNWNLYPACLREMSRVCRPGtGRAVLLTQDKKCFTKALSGMghVWR 465
                        ****************************************************************999********************999** PP

                        EEEEEETTEEEEEE CS
            UPF0020 183 kvkeknvklglllk 196
                        kv++++v++g+l++
  SwissProt::P97770 466 KVHVVWVNIGGLHA 479
                        **********9985 PP



Or compare SwissProt::P97770 to CDD or PaperBLAST