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Align VIMSS10095099 to PF01170 (UPF0020)

VIMSS10095099 has 477 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-16   46.8   0.0      2e-15   43.1   0.0    2.2  1  VIMSS10095099  


Domain annotation for each sequence (and alignments):
>> VIMSS10095099  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.1   0.0     2e-15     2e-15       3     140 ..     193     314 ..     192     321 .. 0.90

  Alignments for each domain:
  == domain 1  score: 43.1 bits;  conditional E-value: 2e-15
                    SS-SS---SS-HHHHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHH..... CS
        UPF0020   3 yRefngpapLketLAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgar..... 93 
                     R + gp+++ +++A  + + a+++ g+  +DP+ G+G+il+ aa  ga  +                          g+D+d rvv+ +r     
  VIMSS10095099 193 SRTYLGPTAMDAEMAFLMANQAKATSGKLVYDPFVGTGSILVSAARFGAMTM--------------------------GADIDIRVVRDGRgpdcn 262
                    5999*********************************************999..........................**********99866666 PP

                    ..HHHHHTT-GGGEEEEE--GGG--...STTS---EEEE----------HHH CS
        UPF0020  94 ..eNaekagvgdliefsqadaakLr...lkegevdvivtnpPYGerlgskka 140
                      +N +++g+   +++  +d+   +     ++ +d+i+++pPYG r g  k+
  VIMSS10095099 263 vwSNFKQYGLPMPVALLRMDNNVPPwrsGLKEIFDAIICDPPYGVRAGGRKS 314
                    667****************99855477755568*************997765 PP



Or compare VIMSS10095099 to CDD or PaperBLAST