VIMSS10159935 has 208 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-13 36.4 0.1 1.2e-12 34.1 0.1 1.9 1 VIMSS10159935
Domain annotation for each sequence (and alignments):
>> VIMSS10159935
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 34.1 0.1 1.2e-12 1.2e-12 49 152 .. 69 149 .. 24 166 .. 0.81
Alignments for each domain:
== domain 1 score: 34.1 bits; conditional E-value: 1.2e-12
UPF0020 49 lganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr..lkegevdvivtnpPYGerlgskkale 142
+ ++++g++ld ++++a +Na++ g + i++ ada+ L+ l+++ +++ npP+G g+++a +
VIMSS10159935 69 RS-------------------------PARVVGVELDDDALATATDNARRVGASAPIDWIRADATRLPlcLPDDRQVTVLMNPPFGAQRGNEHADR 139
33.........................34569************************************9977777779************999998 PP
UPF0020 143 kLYseflrel 152
++ +++++ +
VIMSS10159935 140 AFLDSVASVA 149
8877776665 PP
Or compare VIMSS10159935 to CDD or PaperBLAST