VIMSS10160727 has 464 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.1e-12 34.1 0.0 2.3e-12 33.1 0.0 1.5 1 VIMSS10160727 Domain annotation for each sequence (and alignments): >> VIMSS10160727 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.1 0.0 2.3e-12 2.3e-12 19 145 .. 160 280 .. 157 339 .. 0.73 Alignments for each domain: == domain 1 score: 33.1 bits; conditional E-value: 2.3e-12 UPF0020 19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaak 114 a+v+ + + ++ + DP G+G++lI a ++i +++ + +++ e+++ + +l g++l ++ + + N+ ++ +f++ d + VIMSS10160727 160 AIVKAVDPDHDDDIHDPAAGTGGFLIHAF---EHILE---KTNEGLDLSRDERRELMTENLSGMELVPETRRLGLMNLALHDLQ-PQNFEVGDSLS 248 899999********************884...44442...222222333333344466669*****************998876.6789999**** PP UPF0020 115 Lr.lkegevdvivtnpPYGerlgskkalekLY 145 L ++++++dvi+tnpPYG ++k+a +++ VIMSS10160727 249 LGpHTDESYDVILTNPPYGGNQKKKRARDDFM 280 *987888***************9999987664 PP
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