VIMSS106953 has 199 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.1e-11 28.1 0.1 4.9e-10 25.5 0.1 2.0 1 VIMSS106953
Domain annotation for each sequence (and alignments):
>> VIMSS106953
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.5 0.1 4.9e-10 4.9e-10 25 125 .. 37 115 .. 24 117 .. 0.86
Alignments for each domain:
== domain 1 score: 25.5 bits; conditional E-value: 4.9e-10
UPF0020 25 gwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkege 121
++k+g++ lD CG+G+i +Ea ll+ n ++yg+D+ +++++ +r+Naek gv + i + + +a ++ +++
VIMSS106953 37 RIKKGDKVLDIGCGTGSITVEASLLVGNSG-----------------------RVYGIDKEEKAINLTRRNAEKFGVLNNIVLIKGEAPAILsTINEK 111
67999***********************99.......................59**************************99999987765455667 PP
UPF0020 122 vdvi 125
+d i
VIMSS106953 112 FDRI 115
7766 PP
Or compare VIMSS106953 to CDD or PaperBLAST