VIMSS1147414 has 522 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-10 27.0 0.0 1.3e-09 24.2 0.0 2.2 1 VIMSS1147414
Domain annotation for each sequence (and alignments):
>> VIMSS1147414
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.2 0.0 1.3e-09 1.3e-09 18 134 .. 199 293 .. 195 299 .. 0.91
Alignments for each domain:
== domain 1 score: 24.2 bits; conditional E-value: 1.3e-09
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaak 114
alv + + +dg++++DP CGsG++ + aa + l++yg ++ + ++ ++ N+ +++ e + +
VIMSS1147414 199 QALVAMLEPEDGSKIFDPACGSGGMFVQAAEFTDDKE---------------------SLSFYGQESVDQNLRLCKMNLLMHDLQGDLESGDSLLND 274
699***************************9998888.....................6889**************************999999988 PP
UPF0020 115 LrlkegevdvivtnpPYGer 134
+ + + d +++npP+ +r
VIMSS1147414 275 KH-EGLKADYVIANPPFNIR 293
88.55599********9887 PP
Or compare VIMSS1147414 to CDD or PaperBLAST