VIMSS1746352 has 222 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.2e-13 35.2 0.6 1.9e-10 26.9 0.2 2.9 2 VIMSS1746352
Domain annotation for each sequence (and alignments):
>> VIMSS1746352
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.9 0.2 1.9e-10 1.9e-10 22 131 .. 24 105 .. 19 108 .. 0.91
2 ! 4.5 0.0 0.0014 0.0014 27 49 .. 131 154 .. 127 188 .. 0.85
Alignments for each domain:
== domain 1 score: 26.9 bits; conditional E-value: 1.9e-10
UPF0020 22 rlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlk 118
+++g +g++ lD GsG ++I aa lga+ + ++D+ +r+v+ a Na +a + + + +++ a L+
VIMSS1746352 24 ERSGEVPGRRVLDLCTGSGVVAIAAAHLGAEHV-------------------------TALDICPRAVEYATANAASAAADVDVRLGTWNEA-LN-- 92
678888999999999999999999999999998.........................69******************************99.77.. PP
UPF0020 119 egevdvivtnpPY 131
+ +d++v+npPY
VIMSS1746352 93 WEPFDLVVCNPPY 105
559********** PP
== domain 2 score: 4.5 bits; conditional E-value: 0.0014
UPF0020 27 kdgepllDPmCG.sGtilIEaall 49
dg+++lDP+C G++l E++ l
VIMSS1746352 131 ADGRMILDPLCDvAGAMLAEGGSL 154
5899*******6479999999876 PP
Or compare VIMSS1746352 to CDD or PaperBLAST