VIMSS198665 has 416 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-11 28.9 0.0 9.9e-10 24.5 0.0 2.3 2 VIMSS198665
Domain annotation for each sequence (and alignments):
>> VIMSS198665
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.5 0.0 9.9e-10 9.9e-10 25 118 .. 17 107 .. 6 118 .. 0.79
2 ! 1.7 0.0 0.0097 0.0097 119 132 .. 223 236 .. 204 250 .. 0.82
Alignments for each domain:
== domain 1 score: 24.5 bits; conditional E-value: 9.9e-10
UPF0020 25 gwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlk 118
g+++g+++lDP+CG+Gt l+E +g g+ + + + + ++++ r++ l ++v + a + +++ g++d++ f + d+a+L+l+
VIMSS198665 17 GLNEGSVILDPFCGTGTTLVESKRQGIPSL-GMEANPFAHFATSVKTDWRVDPDLLY-SHSWEVAELALDILRQQGIEDSVPFAA-DIADLPLR 107
7899******************99999888.66666666677778888887777443.357899999999999999999999987.89988844 PP
== domain 2 score: 1.7 bits; conditional E-value: 0.0097
UPF0020 119 egevdvivtnpPYG 132
+++d+++t pPY
VIMSS198665 223 PQSIDAVITSPPYP 236
4599*********5 PP
Or compare VIMSS198665 to CDD or PaperBLAST