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Align VIMSS24683 to PF01170 (UPF0020)

VIMSS24683 has 380 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.7e-11   28.9   0.1    2.5e-10   26.5   0.1    2.0  1  VIMSS24683  


Domain annotation for each sequence (and alignments):
>> VIMSS24683  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.5   0.1   2.5e-10   2.5e-10      74     179 ..     230     336 ..     206     348 .. 0.76

  Alignments for each domain:
  == domain 1  score: 26.5 bits;  conditional E-value: 2.5e-10
                 HHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--.STTS---EEEE----------HHHH..HHHHHHHHHHHHHH-TT..-EEEEEESS CS
     UPF0020  74 raelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnpPYGerlgskkal..ekLYseflrelkrvlrgggrlvlltsen 169
                 ++ +k++g+D+++r+v+ areNa+   v+    +   +a ++  ++++e d+i+++pP   +++++k+   +++++    ++++  +gg+  +   + +
  VIMSS24683 230 NRGAKVVGVDINKRAVELARENAKLNSVKADFVLG--NAFDFIqESKEEWDLIIADPPAIAKTKKEKESilWAIWKLAYYSFQKLKKGGSLFICSCTYQ 326
                 4567899*****************99987655444..44444438888**********99998887765469999999999998666655555555555 PP

                 HHHHHCC--- CS
     UPF0020 170 kalekaleer 179
                  + e+++++ 
  VIMSS24683 327 ISSEEMIRQV 336
                 5666666655 PP



Or compare VIMSS24683 to CDD or PaperBLAST