VIMSS24683 has 380 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-11 29.2 0.1 1.9e-10 26.9 0.1 2.0 1 VIMSS24683
Domain annotation for each sequence (and alignments):
>> VIMSS24683
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.9 0.1 1.9e-10 1.9e-10 74 180 .. 230 337 .. 206 350 .. 0.76
Alignments for each domain:
== domain 1 score: 26.9 bits; conditional E-value: 1.9e-10
UPF0020 74 raelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnpPYGerlgskkal..ekLYseflrelkrvlrgggrlvlltaen 169
++ +k++g+D+++r+v+ areNa+ v+ + + a ++ ++++e d+i+++pP +++++k+ +++++ ++++ +gg+ + + +
VIMSS24683 230 NRGAKVVGVDINKRAVELARENAKLNSVKADFVLGN--AFDFIqESKEEWDLIIADPPAIAKTKKEKESilWAIWKLAYYSFQKLKKGGSLFICSCTYQ 326
4567899*****************999876555444..4444438888**********99999887765469999999999999666655555555556 PP
UPF0020 170 kalekaleera 180
+ e+++++ +
VIMSS24683 327 ISSEEMIRQVR 337
66666666555 PP
Or compare VIMSS24683 to CDD or PaperBLAST