VIMSS271833 has 252 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-11 30.4 0.0 3.3e-11 29.4 0.0 1.5 1 VIMSS271833
Domain annotation for each sequence (and alignments):
>> VIMSS271833
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 29.4 0.0 3.3e-11 3.3e-11 74 169 .. 73 179 .. 45 197 .. 0.73
Alignments for each domain:
== domain 1 score: 29.4 bits; conditional E-value: 3.3e-11
UPF0020 74 r.aelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnpPYG........erlgskkalekL.Yseflrelkrvlrggg 160
+++++ g++l +++ q+a +N e ++++i++ q d+ ++ + +++d+iv+npPY e+ ++++ +L ++++l+ +++ + ++g
VIMSS271833 73 SlPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIHQFAeNHPHQYDLIVSNPPYFapaiacrdEARDTARYTGSLtHDALLNCAEKLITEDG 170
2478899*************************************544459**********52221111123344444455523456667777777777 PP
UPF0020 161 rlvlltaen 169
+ +++++++
VIMSS271833 171 MFCVVLPHE 179
777777665 PP
Or compare VIMSS271833 to CDD or PaperBLAST