VIMSS31518 has 198 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-11 29.0 0.0 7.8e-11 28.1 0.0 1.5 1 VIMSS31518
Domain annotation for each sequence (and alignments):
>> VIMSS31518
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 28.1 0.0 7.8e-11 7.8e-11 76 182 .. 57 173 .. 33 186 .. 0.80
Alignments for each domain:
== domain 1 score: 28.1 bits; conditional E-value: 7.8e-11
UPF0020 76 elk.lygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPY..Gerlgskkale........kLYseflrelkrvlrgggrlv 163
+++ ++g+D+++++++ a +Na+ g+++ + + + + ++r g +d+iv npPY Ge +++k +l + s fl ++k l+++gr++
VIMSS31518 57 RARfVVGLDINEKAINLAWKNAKINGIKNVVFILSDLFENIR---GTFDLIVFNPPYlpGEEIKDKVDLAliggktggEVISRFLGSVKDYLSSRGRIL 152
444599*********************************999...67**********888999998654322222222788999999999999999999 PP
UPF0020 164 lltaenk..alekaleeralr 182
l+ ++ ++eka++er +
VIMSS31518 153 LIYSSLTglDVEKAFKERGFS 173
998875422678888887555 PP
Or compare VIMSS31518 to CDD or PaperBLAST