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Align VIMSS31518 to PF01170 (UPF0020)

VIMSS31518 has 198 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.8e-11   28.6   0.0    1.2e-10   27.5   0.0    1.5  1  VIMSS31518  


Domain annotation for each sequence (and alignments):
>> VIMSS31518  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.5   0.0   1.2e-10   1.2e-10      76     182 ..      57     173 ..      49     186 .. 0.78

  Alignments for each domain:
  == domain 1  score: 27.5 bits;  conditional E-value: 1.2e-10
                 H--.EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS---EEEE----..------HHHHH........HHHHHHHHHHHHH-TT..-EE CS
     UPF0020  76 elk.lygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPY..Gerlgskkale........kLYseflrelkrvlrgggrlv 163
                 +++ ++g+D+++++++ a +Na+  g+++ + + +  + ++r   g +d+iv npPY  Ge +++k +l         +  s fl ++k  l+++gr++
  VIMSS31518  57 RARfVVGLDINEKAINLAWKNAKINGIKNVVFILSDLFENIR---GTFDLIVFNPPYlpGEEIKDKVDLAliggktggEVISRFLGSVKDYLSSRGRIL 152
                 444599*********************************999...67**********888999998654312222222788899999999999999999 PP

                 EEEESSH..HHHHCC---ESE CS
     UPF0020 164 lltsenk..alekaleeralr 182
                 l+ s+    ++eka++er + 
  VIMSS31518 153 LIYSSLTglDVEKAFKERGFS 173
                 998875422677888877554 PP



Or compare VIMSS31518 to CDD or PaperBLAST