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Align VIMSS31693 to PF01170 (UPF0020)

VIMSS31693 has 396 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    7.7e-11   28.2   0.0    6.9e-10   25.1   0.0    2.1  1  VIMSS31693  


Domain annotation for each sequence (and alignments):
>> VIMSS31693  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.1   0.0   6.9e-10   6.9e-10      27     130 ..     216     298 ..     210     300 .. 0.83

  Alignments for each domain:
  == domain 1  score: 25.1 bits;  conditional E-value: 6.9e-10
                 -TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--G....GG--STTS- CS
     UPF0020  27 kpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqada....akLrlkege 121
                 +pg++ lD +  +G+++I aa+ ga+ +                         +g+D+ +r++++a+eNa+  gv+d+++f +  a     kL++k ++
  VIMSS31693 216 QPGDRVLDVFTYTGGFAIHAAIAGADEV-------------------------IGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAfeemEKLQKKGEK 289
                 7788888888888888888888888877.........................8***************************997642222677766679 PP

                 --EEEE--- CS
     UPF0020 122 vdvivtnpP 130
                 +d++v +pP
  VIMSS31693 290 FDIVVLDPP 298
                 ********9 PP



Or compare VIMSS31693 to CDD or PaperBLAST