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Align VIMSS500031 to PF01170 (UPF0020)

VIMSS500031 has 335 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.1e-27   82.2   0.0    2.4e-26   78.7   0.0    2.1  1  VIMSS500031  


Domain annotation for each sequence (and alignments):
>> VIMSS500031  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.7   0.0   2.4e-26   2.4e-26       7     176 ..     163     308 ..     157     326 .. 0.87

  Alignments for each domain:
  == domain 1  score: 78.7 bits;  conditional E-value: 2.4e-26
      UPF0020   7 ngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdl 104
                  +  ++L + LA al+rla++++g + lDP+ GsGti++Eaa       p                       +y+ Dld++ +  are a + g++  
  VIMSS500031 163 ALRGSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSP-----------------------VYAGDLDEKRLGLAREAALASGLS-W 236
                  557899**********************************965554443.......................9**************999888876.6 PP

      UPF0020 105 iefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenkalekal 176
                  i f  ada++L++   evd i++npP G rlg+k+ l +LY  flr +   l  ggr +llt     l++al
  VIMSS500031 237 IRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALLKRAL 308
                  788888******8888**************************************999999987777666665 PP



Or compare VIMSS500031 to CDD or PaperBLAST