VIMSS54360 has 793 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.6e-10 27.1 0.0 4.3e-09 22.5 0.0 2.7 2 VIMSS54360 Domain annotation for each sequence (and alignments): >> VIMSS54360 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.5 0.0 4.3e-09 4.3e-09 32 141 .. 227 320 .. 224 327 .. 0.75 2 ? 1.1 0.0 0.015 0.015 79 113 .. 721 755 .. 691 771 .. 0.71 Alignments for each domain: == domain 1 score: 22.5 bits; conditional E-value: 4.3e-09 UPF0020 32 llDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekag.vgdliefsqadaakLrlkegevdvivtnp 129 +DP CGsG++l E +++ +p + +++ lyg +++ + + +++ g + i + + ++ +++ +d +++np VIMSS54360 227 VYDPACGSGGMLTETQNFVEEKYPASN----------------RDIYLYGKEINDETYAICKSDMMIKGnNPENIRVGSTLSTDEF-SSNRFDFMLSNP 308 79**************99999998555................6677888888888888888876544313455555554444333.4558******** PP UPF0020 130 PYGerlgskkal 141 PYG++ s+++ VIMSS54360 309 PYGKSWASEQKH 320 *****9998865 PP == domain 2 score: 1.1 bits; conditional E-value: 0.015 UPF0020 79 lygsDldrrvvqgareNaekagvgdliefsqadaa 113 y +D + +v+ a N+e+ ++g +i+f++ + VIMSS54360 721 QYFLDEVKPHVDEAWINLESVKIGYEISFNKYFYR 755 5667888999999999****999999999986443 PP
Or compare VIMSS54360 to CDD or PaperBLAST