VIMSS5814385 has 517 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-12 33.4 0.0 2.9e-12 32.8 0.0 1.3 1 VIMSS5814385
Domain annotation for each sequence (and alignments):
>> VIMSS5814385
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 32.8 0.0 2.9e-12 2.9e-12 19 146 .. 201 322 .. 196 376 .. 0.82
Alignments for each domain:
== domain 1 score: 32.8 bits; conditional E-value: 2.9e-12
UPF0020 19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear...aelklygsDldrrvvqgareNaekagvgdl.iefsqad 111
+v+l + + ++++ DP G+ ++l+E a ++ + e+ ++ +e+r ++ + g D d+ +++ + N + gv++ +e+++
VIMSS5814385 201 MIVELMNPQVTDKICDPAAGTAGFLVESAEFLQDKKK----EE-IFYN----KENRhyfHNEMFTGYDTDQTMLRIGAMNMLSHGVDNPnVEYQDSL 288
589999***********************99999882....22.2222....222222344459**********************98637777766 PP
UPF0020 112 aakLrlkegevdvivtnpPYGerlgskkalekLYs 146
+ + +++e+ +i +npP+ +l+ + ++L +
VIMSS5814385 289 SEQNT-DRDEYSLIMANPPFKGSLDYNSVSKDLLK 322
66666.888***********999988777776655 PP
Or compare VIMSS5814385 to CDD or PaperBLAST