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Align VIMSS6585884 to PF01170 (UPF0020)

VIMSS6585884 has 433 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-15   43.7   0.0    2.3e-14   39.7   0.0    2.2  1  VIMSS6585884  


Domain annotation for each sequence (and alignments):
>> VIMSS6585884  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   39.7   0.0   2.3e-14   2.3e-14       3     134 ..     184     297 ..     183     303 .. 0.79

  Alignments for each domain:
  == domain 1  score: 39.7 bits;  conditional E-value: 2.3e-14
                   SS-SS---SS-HHHHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHH..HHHHHHH CS
       UPF0020   3 yRefngpapLketLAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvq..gareNae 97 
                   +R+++g ++  ++L+ +  ++a++kpg+ ++DP+ G+G++l+ ++  g+ ++                          gsD+d r+++  ga+ N +
  VIMSS6585884 184 KRPYKGTTSFEAELSLVSANIAQVKPGTIMYDPFAGTGSFLVAGGHFGSLVI--------------------------GSDIDGRMIRgkGAQVNIS 254
                   79***********************************************999..........................*********7336998865 PP

                   HT..T-G...GGEEEEE--GGG--.STTS---EEEE------- CS
       UPF0020  98 ka..gvg...dliefsqadaakLr.lkegevdvivtnpPYGer 134
                   +   + g   ++ ++ ++d+++   +++  +d+i+++pPYG+r
  VIMSS6585884 255 ANfkKYGessQFLDVLTMDFTNNAlRNNLVIDTILCDPPYGIR 297
                   4311333001444555555554333366699**********99 PP



Or compare VIMSS6585884 to CDD or PaperBLAST