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Align VIMSS7646784 to PF01170 (UPF0020)

VIMSS7646784 has 493 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      2e-13   36.6   0.0    4.4e-13   35.5   0.0    1.6  1  VIMSS7646784  


Domain annotation for each sequence (and alignments):
>> VIMSS7646784  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.5   0.0   4.4e-13   4.4e-13      18     170 ..     176     327 ..     172     348 .. 0.72

  Alignments for each domain:
  == domain 1  score: 35.5 bits;  conditional E-value: 4.4e-13
                   HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--G.. CS
       UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqada.. 112
                   + +v + + k ge+++DP CG+G++l  a   ++n +            + +  ++  ++++ g+++++     a +N    g++  ++++  +   
  VIMSS7646784 176 RFMVDRVDPKLGESIMDPACGTGGFLACAFDHVKNKY-----------VKSVADHQTLQQQIHGVEKKQLPHLLATTNMLLHGIEVPVQIRHDNTln 261
                   67999*********************66666666666...........2344444556777*******99888999999999998888888766511 PP

                   GG--STTS---EEEE----------........HHHHHHHHHHHHHHHHHH-TT..-EEEEEESSH CS
       UPF0020 113 akLrlkegevdvivtnpPYGerlgs........kkalekLYseflrelkrvlrgggrlvlltsenk 170
                   + L   +++ dvivtnpP+G   ++        + + ++  + fl+ + +vl+++gr+++++++  
  VIMSS7646784 262 KPLSSWDEQLDVIVTNPPFGGTEEDgieknfpaEMKTRETADLFLQLIVEVLAKNGRAAVVLPDGT 327
                   556677779***********6533311111111333455566677777888888888877777655 PP



Or compare VIMSS7646784 to CDD or PaperBLAST