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Align VIMSS87986 to PF01170 (UPF0020)

VIMSS87986 has 230 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.8e-11   30.3   0.1    6.4e-11   28.4   0.1    1.8  1  VIMSS87986  


Domain annotation for each sequence (and alignments):
>> VIMSS87986  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.1   6.4e-11   6.4e-11      75     132 ..      76     136 ..      51     151 .. 0.79

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 6.4e-11
                 HH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG.--..STTS---EEEE----- CS
     UPF0020  75 aelklygsDldrrvvqgareNaekagvgdliefsqadaak.Lr..lkegevdvivtnpPYG 132
                 + +++++sDl    v+ ar+Na + g++d++++ q d  + L     +  +dviv+npPY 
  VIMSS87986  76 PAARVWASDLTDGCVDVARRNAAHHGMADRVSVLQGDLFDaLSglGLDRTIDVIVCNPPYI 136
                 46779*******************************97542557645568**********5 PP



Or compare VIMSS87986 to CDD or PaperBLAST