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Align VIMSS931374 to PF01170 (UPF0020)

VIMSS931374 has 301 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.9e-26   78.5   0.0    1.4e-25   76.2   0.0    1.9  1  VIMSS931374  


Domain annotation for each sequence (and alignments):
>> VIMSS931374  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   76.2   0.0   1.4e-25   1.4e-25       3     189 ..     136     286 ..     134     293 .. 0.86

  Alignments for each domain:
  == domain 1  score: 76.2 bits;  conditional E-value: 1.4e-25
                  SS-SS---SS-HHHHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT CS
      UPF0020   3 yRefngpapLketLAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekag 100
                  +R+++  ++L+ +LA+ +++l++ +  +  lDP+ G+GtilIEa +lg +++                          g+D+d+++++ ++ N+ +  
  VIMSS931374 136 KRPYTRSGSLNVELARLMINLSRSR--SNVLDPFVGTGTILIEANWLGLKCI--------------------------GIDIDEQMIKNTKINLDYFH 205
                  79********************877..579**********************..........................*****************988 PP

                  -GGGEEEEE--GGG--STTS---EEEE----------HHHHHHHHHHHHHHHHHH-TT..-EEEEEESSHHHHHCC---ESEEEEEEET CS
      UPF0020 101 vgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltsenkalekaleeralrkvkeknv 189
                   +   e+  ad   L+ ++   ++ivt+pPYG++ +  k l +LY++f  e+++v+++   l++ t ++ +  + l++  ++++k   v
  VIMSS931374 206 YE--CELIHADTNTLPITR--SEAIVTDPPYGRSFTP-KGLSELYQNFFAEASNVTKN---LIFTTDSRFDWRDTLKSYGFKQIKIHTV 286
                  76..566677777778334..568*********9975.56899***********9999...8888888888888888888888877766 PP



Or compare VIMSS931374 to CDD or PaperBLAST