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Align WP_005816663.1 to PF01170 (UPF0020)

WP_005816663.1 has 477 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.18
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.4e-15   41.3   0.0    1.7e-14   40.1   0.0    1.5  1  WP_005816663.1  


Domain annotation for each sequence (and alignments):
>> WP_005816663.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.1   0.0   1.7e-14   1.7e-14      18     180 ..     160     321 ..     156     336 .. 0.76

  Alignments for each domain:
  == domain 1  score: 40.1 bits;  conditional E-value: 1.7e-14
                     HHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEE.EEE-- CS
         UPF0020  18 aalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlie.fsqad 111
                      a+v   + + ge+  DP CG+G++l+ a     ++            +++ ++++ +++ l g+D+ + vv+ a  N+   g+g   + + + d
  WP_005816663.1 160 QAMVDCVNPQIGETVCDPACGTGGFLLAA-YDHMKRQ----------SQDKGQRDFLNNQALHGVDNTPLVVTLASMNLYLHGIGTDRSpIACED 243
                     79************************955.4444444..........24556667778999***********************87655144444 PP

                     GGG--.STTS---EEEE----------HHHH..HHHHHH.......HHHHHHHH-TT..-EEEEEESSHHHHHCC---.E CS
         UPF0020 112 aakLr.lkegevdvivtnpPYGerlgskkal..ekLYse.......flrelkrvlrgggrlvlltsenkalekaleer.a 180
                        L+ +++  v+vi++npP+G r     ++   ++Y e       fl+ +  +l++ggr+++++++n  +e  ++e  +
  WP_005816663.1 244 S--LEkEPSTLVNVILANPPFGTRPAGSVDInrSDFYVEtknnqlnFLQHMMLMLKTGGRAAVVLPDNVLFEGNAGETiR 321
                     4..55458889************965544443788997533444448899999999999**9999999999987776644 PP



Or compare WP_005816663.1 to CDD or PaperBLAST