WP_017683043.1 has 750 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-51 159.3 0.0 1.8e-46 144.4 0.0 2.3 2 WP_017683043.1
Domain annotation for each sequence (and alignments):
>> WP_017683043.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 144.4 0.0 1.8e-46 1.8e-46 1 194 [. 165 380 .. 165 382 .. 0.91
2 ! 12.5 0.0 4.7e-06 4.7e-06 75 130 .. 610 666 .. 576 675 .. 0.80
Alignments for each domain:
== domain 1 score: 144.4 bits; conditional E-value: 1.8e-46
UPF0020 1 RgyRvfngpapLketLAaalvrlagw....kdgepllDPmCGsGtilIEaallganiapgllrefvye.............lkaeaeeear.... 74
RgyR +g apLke+LAaa++ +agw +g l+DPmCG Gt+l+Ea++++a+iap re++++ l++ea ++a+
WP_017683043.1 165 RGYRLQQGAAPLKENLAAAILIRAGWpriaAEGGALADPMCGVGTFLVEAGMIAADIAPNIKRERWGFsawlghvptlwrkLHDEALARAEagla 259
9*************************5554579**********************************************9955555555554441 PP
UPF0020 75 aelk.lygsDldrrvvqgareNaekagvgdliefsqadaakLr..lkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvllt 166
++ + ++g + d+r++q +r+N e+ag++d i+++q ++a ++ ++++ +++++npPYGerlg++ +l LY++++++l + + + + ++++
WP_017683043.1 260 KTPSwIRGYEADPRLIQPGRNNIERAGLSDWIKVYQGEVATFEprPDQNQKGLVICNPPYGERLGDEASLLYLYQNLGERLRQACLN--WEAAVF 352
55449*************************************996555699************************************..****** PP
UPF0020 167 aenkalekaleeralrkvkeknvklgll 194
++ +l k ++ r+ +++ n+ l +
WP_017683043.1 353 TGAPDLGKRMGIRSHKQYSFWNGALPCK 380
******************9999999886 PP
== domain 2 score: 12.5 bits; conditional E-value: 4.7e-06
UPF0020 75 aelklygsDldrrvvqgareNaekagvgdliefsqadaak.LrlkegevdvivtnpP 130
+ +Dl r +++ ar+N++ g +d+ ++q d+ + L+++++e+d+i +pP
WP_017683043.1 610 GARSTTSVDLSRTYLDWARRNLSLNGFSDKNRLEQGDVMAwLQANRDEYDLIFIDPP 666
44457899*****************************9763778888*********9 PP
Or compare WP_017683043.1 to CDD or PaperBLAST