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Align P44842 to PF01205 (UPF0029)

P44842 has 206 amino acids

Query:       UPF0029  [M=105]
Accession:   PF01205.19
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.3e-33   99.8   0.0      2e-32   97.9   0.0    1.8  2  P44842    


Domain annotation for each sequence (and alignments):
>> P44842  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.9   0.0     2e-32     2e-32       1     105 []      18     125 ..      18     125 .. 0.97
   2 ?   -0.6   0.0     0.093     0.093      48      69 ..     182     203 ..     148     205 .. 0.65

  Alignments for each domain:
  == domain 1  score: 97.9 bits;  conditional E-value: 2e-32
              TTEEEEEEEEE-SSHHHHHHHHHHH--..TTSSEEEEEE....EE....TTEE-TTSST..SHHHHHHHHHHTTB-SEEEEEEEE--SS--HHHHH.HHHHH CS
  UPF0029   1 kkSrFiavlaaveseeevkaileelkkenkkathniyAyrlrqkvekvnedsdddgEpa..AGkkllelLekeklenvlvvvtRwfGGikLGpgrl.raise 99 
              kkSrFi++l ++e  e+++a+ +++k+e+++a+h+++A    + +++++ +++ddgEpa  AGk++l++L+ ++l ++ +vv+R++GGi+LG+g+l ra+ +
   P44842  18 KKSRFITYLQHTEGLEDARAFWAKIKQEHPNARHHCWAAVAGKPTDSLQLGFSDDGEPAgtAGKPMLSALQGSQLGEISAVVVRYYGGILLGTGGLvRAYGN 119
              8**************************************888888889999*************************************************** PP

              HHHHHH CS
  UPF0029 100 aareaL 105
               +++aL
   P44842 120 GVQQAL 125
              ***997 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.093
              ..TTEE-TTSSTSHHHHHHHHH CS
  UPF0029  48 vnedsdddgEpaAGkkllelLe 69 
              +++ s++  E+++G+ + +lLe
   P44842 182 IEAFSSELTEKSSGRLVIQLLE 203
              3344777789999999999986 PP



Or compare P44842 to CDD or PaperBLAST