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Align SwissProt::O55091 to PF01205 (UPF0029)

SwissProt::O55091 has 318 amino acids

Query:       UPF0029  [M=105]
Accession:   PF01205.19
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.9e-38  117.4   0.0    2.8e-38  116.8   0.0    1.3  1  SwissProt::O55091  


Domain annotation for each sequence (and alignments):
>> SwissProt::O55091  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.8   0.0   2.8e-38   2.8e-38       1     105 []     181     288 ..     181     288 .. 0.91

  Alignments for each domain:
  == domain 1  score: 116.8 bits;  conditional E-value: 2.8e-38
                        TTEEEEEEEEE-SSHHHHHHHHHHH--..TT..SSEEEEEE....E.E....TTEE-TTSSTSHHHHHHHHHHTTB-SEEEEEEEE--SS-- CS
            UPF0029   1 kkSrFiavlaaveseeevkaileelkkenkk..athniyAyrlrqk.vekvnedsdddgEpaAGkkllelLekeklenvlvvvtRwfGGikL 89 
                        ++S+F+a++a+v  +e+vk +l++l +++k   athniyAyr+  + +++  +d++ddgE+aAG +ll+l+e  +++nv+vvv+Rw+GGi+L
  SwissProt::O55091 181 RRSTFQAHVAPVVCPEQVKLVLAKLYENKKIasATHNIYAYRIFCEdKQTFLQDCEDDGETAAGGRLLHLMEILNVKNVMVVVSRWYGGILL 272
                        79*********************9988666588********9765404457889************************************** PP

                        HHHHHHHHHHHHHHHH CS
            UPF0029  90 GpgrlraiseaareaL 105
                        Gp+r+++i+++ar++L
  SwissProt::O55091 273 GPDRFKHINNCARNIL 288
                        *************986 PP



Or compare SwissProt::O55091 to CDD or PaperBLAST