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Align VIMSS134896 to PF01205 (UPF0029)

VIMSS134896 has 211 amino acids

Query:       UPF0029  [M=105]
Accession:   PF01205.19
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-37  113.7   0.0    3.9e-37  113.1   0.0    1.3  1  VIMSS134896  


Domain annotation for each sequence (and alignments):
>> VIMSS134896  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.1   0.0   3.9e-37   3.9e-37       1     103 [.      17     120 ..      17     122 .. 0.95

  Alignments for each domain:
  == domain 1  score: 113.1 bits;  conditional E-value: 3.9e-37
                  TTEEEEEEEEE-SSHHHHHHHHHHH--..TTSSEEEEEE....EE....TTEE-TTSST..SHHHHHHHHHHTTB-SEEEEEEEE--SS--HHHHH.H CS
      UPF0029   1 kkSrFiavlaaveseeevkaileelkkenkkathniyAyrlrqkvekvnedsdddgEpa..AGkkllelLekeklenvlvvvtRwfGGikLGpgrl.r 95 
                  kkSrFi+++ +v seee++++++++kke+ kathn++A+ + ++   + +  +ddgEp+  AG ++l +Le+++l+nv+vvvtR+fGGikLG+g+l r
  VIMSS134896  17 KKSRFICHAKRVYSEEEARDFITAIKKEHYKATHNCSAFIIGERS--EIKRTSDDGEPSgtAGVPMLGVLENHNLTNVCVVVTRYFGGIKLGAGGLiR 112
                  8**************************************888887..5899*********************************************** PP

                  HHHHHHHH CS
      UPF0029  96 aiseaare 103
                  a++ ++  
  VIMSS134896 113 AYAGSVAL 120
                  **988765 PP



Or compare VIMSS134896 to CDD or PaperBLAST