PaperBLAST – Find papers about a protein or its homologs

 

Align P77522 to PF01458 (SUFBD)

P77522 has 495 amino acids

Query:       SUFBD  [M=218]
Accession:   PF01458.21
Description: SUF system FeS cluster assembly, SufBD
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.7e-76  242.2   0.2    3.4e-76  241.9   0.2    1.1  1  P77522    


Domain annotation for each sequence (and alignments):
>> P77522  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  241.9   0.2   3.4e-76   3.4e-76       2     218 .]     234     466 ..     233     466 .. 0.96

  Alignments for each domain:
  == domain 1  score: 241.9 bits;  conditional E-value: 3.4e-76
   SUFBD   2 qfertlivveegaevtiieeyagc............gvveivvgknAklkyvevqnw......senvlnlatkra.eegadakvelvevslggkltrkepsve 85 
             qfert++v++e+++v++i   +gc            +vve++++knA++ky++vqnw       +++ln++tkra  eg+++k+++++ ++g+++t+k+ps++
  P77522 234 QFERTILVADEDSYVSYI---EGCsapvrdsyqlhaAVVEVIIHKNAEVKYSTVQNWfpgdnnTGGILNFVTKRAlCEGENSKMSWTQSETGSAITWKYPSCI 333
             89****************...555555555555555*************************9888**********87799*********************** PP

   SUFBD  86 lkgegaeaelngvylakgkqhldtgtkvdhngpntsseilskgvlkdksravfrGkikvekgaqktdahqecrnLllsdkaradtkPeleieaddvkcsHgAt 188
             l+g+++  e+++v+l++g+q++dtgtk++h g+nt+s+i+skg+++++s++++rG++k+ + a++++++++c+++l++ ++ a+t P++e++++ ++++H+At
  P77522 334 LRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEAT 436
             ******************************************************************************************************* PP

   SUFBD 189 vgkideeqlfYLmsRGlseeeArrlivrgf 218
             +++i e+qlfY+ +RG+see+A ++iv+gf
  P77522 437 TSRIGEDQLFYCLQRGISEEDAISMIVNGF 466
             *****************************9 PP



Or compare P77522 to CDD or PaperBLAST