VIMSS33234 has 846 amino acids
Query: SUFBD [M=218]
Accession: PF01458.21
Description: SUF system FeS cluster assembly, SufBD
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.6e-82 260.5 0.1 4.4e-78 248.0 0.1 2.3 2 VIMSS33234
Domain annotation for each sequence (and alignments):
>> VIMSS33234
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 10.2 0.0 2.4e-05 2.4e-05 2 26 .. 233 259 .. 232 298 .. 0.75
2 ! 248.0 0.1 4.4e-78 4.4e-78 23 218 .] 622 817 .. 596 817 .. 0.96
Alignments for each domain:
== domain 1 score: 10.2 bits; conditional E-value: 2.4e-05
SUFBD 2 qfertlivveegaevtiieeyagc.....g 26
qfertli+++eg++v+++ +gc
VIMSS33234 233 QFERTLIIADEGSYVHYV---EGClpageL 259
89****************...777544331 PP
== domain 2 score: 248.0 bits; conditional E-value: 4.4e-78
SUFBD 23 agcgvveivvgknAklkyvevqnwsenvlnlatkraeegadakvelvevslggkltrkepsvelkgegaeaelngvylakgkqhldtgtkvdhngpnts 121
++ +vvei+v+ A+++y+++qnws+nv+nl+tkra+ +a a++e++++++g+k+t+k+p v ++ge+a+ e+ +v++a+++qh+dtg+k+ h +pnts
VIMSS33234 622 LHSAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTS 720
677************************************************************************************************ PP
SUFBD 122 seilskgvlkdksravfrGkikvekgaqktdahqecrnLllsdkaradtkPeleieaddvkcsHgAtvgkideeqlfYLmsRGlseeeArrlivrgf 218
s+i+sk+v+++++r+++rG+++v+kga++++++++c++Ll++ +r+dt+P+++i++ddv+++H+Atv+k++e+qlfYLmsRGl+e+eA++++vrgf
VIMSS33234 721 SNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGF 817
************************************************************************************************9 PP
Or compare VIMSS33234 to CDD or PaperBLAST