PaperBLAST – Find papers about a protein or its homologs

 

Align WP_011258210.1 to PF01458 (SUFBD)

WP_011258210.1 has 485 amino acids

Query:       SUFBD  [M=218]
Accession:   PF01458.21
Description: SUF system FeS cluster assembly, SufBD
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-74  235.8   0.0    3.1e-74  235.5   0.0    1.1  1  WP_011258210.1  


Domain annotation for each sequence (and alignments):
>> WP_011258210.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  235.5   0.0   3.1e-74   3.1e-74       2     218 .]     223     456 ..     222     456 .. 0.95

  Alignments for each domain:
  == domain 1  score: 235.5 bits;  conditional E-value: 3.1e-74
           SUFBD   2 qfertlivveegaevtiieeyagc............gvveivvgknAklkyvevqnw.......senvlnlatkraee.gadakvelvevslggk 76 
                     qfertliv e++a+v+++   +gc            +vve+v  ++A++ky++vqnw        ++++n++tkrae+ ga++kv++++v++g++
  WP_011258210.1 223 QFERTLIVCEDKAYVSYL---EGCtapmrdenqlhaAVVELVTLDDAEIKYSTVQNWypgdeegRGGIYNFVTKRAECrGARSKVTWTQVETGSA 314
                     89****************...555555555555555**************************9777**********87588************** PP

           SUFBD  77 ltrkepsvelkgegaeaelngvylakgkqhldtgtkvdhngpntsseilskgvlkdksravfrGkikvekgaqktdahqecrnLllsdkaradtk 171
                     +t+k+ps+ l g+++  e+++v+l++++q++dtgtk++h g++++s+i+skg++++++++++rG++kv+++a +++++++c++Ll+++++ a+t 
  WP_011258210.1 315 ITWKYPSCVLIGDDSVGEFHSVALTHHRQQADTGTKMIHIGKRSKSKIVSKGISAGRGQNTYRGLVKVDRNADGARNYTQCDSLLIGKQCGAHTF 409
                     *********************************************************************************************** PP

           SUFBD 172 PeleieaddvkcsHgAtvgkideeqlfYLmsRGlseeeArrlivrgf 218
                     P++e+++  ++++H+At++ki+++qlfY+++RG+s+e+A +liv gf
  WP_011258210.1 410 PYIEVKNPGATVEHEATTSKISDDQLFYCRARGISQEDAVSLIVDGF 456
                     **********************************************9 PP



Or compare WP_011258210.1 to CDD or PaperBLAST