NP_001309670.1 has 797 amino acids
Query: CNNM [M=181] Accession: PF01595.24 Description: Cyclin M transmembrane N-terminal domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.2e-37 113.3 0.4 5.2e-37 113.3 0.4 1.6 2 NP_001309670.1 Domain annotation for each sequence (and alignments): >> NP_001309670.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 113.3 0.4 5.2e-37 5.2e-37 2 174 .. 203 366 .. 202 374 .. 0.91 2 ? -3.9 0.1 0.5 0.5 52 71 .. 566 585 .. 559 598 .. 0.60 Alignments for each domain: == domain 1 score: 113.3 bits; conditional E-value: 5.2e-37 CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgn....kgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvi 92 ++l+ll++s++fs+++++l++ls+++l+ ++g+ + a r+l+++++ ++lL tllign +vn++ s+l++ l+ + +a ++v+ NP_001309670.1 203 CLLILLCFSGLFSGLNLGLMTLSPYELQLYIASGTeqekRDAGRILPIRKKGNQLLCTLLIGNVVVNVGVSLLMDQLVGSGFA--------VLVA 289 678999*********************66655555333388888*********************************999995........5566 PP CNNM 93 vtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseee 174 t i+vfGEi+P++l++k ++i +++p+++vl +l+yPl+w+++++++++l k+e + + ++ l +++++se++ NP_001309670.1 290 ATSCIVVFGEIIPQALCVKLGLPIGARTIPITQVLLFLMYPLTWPISKVLDIFL-----KEELTRSLERNKLVEMLKLSEKS 366 6*****************************************************.....9*****************99886 PP == domain 2 score: -3.9 bits; conditional E-value: 0.5 CNNM 52 lLstlligntlvnillsala 71 l +t++++ t i++s ++ NP_001309670.1 566 LAVTIQVMSTCHKIFSSNYI 585 44566666666666655544 PP
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