SwissProt::P0C588 has 772 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-33 101.8 1.0 3e-33 101.1 1.0 1.3 1 SwissProt::P0C588
Domain annotation for each sequence (and alignments):
>> SwissProt::P0C588
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 101.1 1.0 3e-33 3e-33 2 172 .. 186 347 .. 185 356 .. 0.92
Alignments for each domain:
== domain 1 score: 101.1 bits; conditional E-value: 3e-33
CNNM 2 iallllllsaffsaaEtAlvslsklrl....eelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavvia 89
++l+ll+ls++fs+++++l++l++ +l + ek++++a+++++++++ + lL +ll+gn lvn++l++l++ l+ + + +a
SwissProt::P0C588 186 LVLVLLVLSGIFSGLNLGLMALDPMELrivqNCGTEKERRYARKIEPIRRKGNYLLCSLLLGNVLVNTSLTILLDNLIGSGI--------MA 269
679999*********************77766667778899*********************************99988876........57 PP
CNNM 90 tvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveese 172
++ t+ i++fGEilP++l+ ++ +++ ++++++++++l++Pl++++++l++++l ++e ++++ +e l++++++ e
SwissProt::P0C588 270 VASSTIGIVIFGEILPQALCSRHGLAVGANTIVLTKIFMLLTFPLSFPISKLLDFVL-----GQEIRTVYNREKLMEMLKVTE 347
7777*****************************************************.....9***************99876 PP
Or compare SwissProt::P0C588 to CDD or PaperBLAST