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Align SwissProt::Q0GA42 to PF01595 (DUF21)

SwissProt::Q0GA42 has 951 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
      6e-28   83.9   0.0    9.2e-28   83.3   0.0    1.3  1  SwissProt::Q0GA42  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q0GA42  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.3   0.0   9.2e-28   9.2e-28       3     169 ..     229     407 ..     227     414 .. 0.86

  Alignments for each domain:
  == domain 1  score: 83.3 bits;  conditional E-value: 9.2e-28
              DUF21   3 ivlllllsaffsgaEtAlvslsrlrleelaekgk....kkakrllkllknperlLstlligntlvnil.lsalatalfvellae......ga 83 
                        ++lll+lsa+fsg+ ++l+sl++++l+ l+ +g+    ++a+r++ ++ +  +lL+tll+g   +n + +++l ++l   +  +       +
  SwissProt::Q0GA42 229 ALLLLALSALFSGLRLSLLSLDPVELRVLRNSGSaaeqEQARRVQAVRGRGTHLLCTLLLGQAGANAAlAGWLYASLPPGVGDPgedsgeAG 320
                        68999*********************66666666555599**************************75268999999666665577787644 PP

              DUF21  84 lavviatviv.tllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlilesesepavseeelkklveeseee 169
                        + +++  ++v t ++++ +Ei+P s++ ++ ++ia+ ++ ++r+lm   +P++++l++ll++ l +e ++++++e l + +++++  
  SwissProt::Q0GA42 321 VHFPWLPALVcTGAVFLGAEICPYSVCSRHGLAIASHSVCLTRLLMAAAFPVCYPLGRLLDWALRQEISTFYTREKLLETLRAADPY 407
                        55555557777******************************************************************9999887665 PP



Or compare SwissProt::Q0GA42 to CDD or PaperBLAST