SwissProt::Q3TWN3 has 875 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-33 101.5 0.1 3.6e-33 100.8 0.1 1.3 1 SwissProt::Q3TWN3
Domain annotation for each sequence (and alignments):
>> SwissProt::Q3TWN3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 100.8 0.1 3.6e-33 3.6e-33 3 171 .. 262 421 .. 260 431 .. 0.91
Alignments for each domain:
== domain 1 score: 100.8 bits; conditional E-value: 3.6e-33
CNNM 3 allllllsaffsaaEtAlvslsklrl....eelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviat 90
+ lll+ls++fs+++++l++l++ +l + ek++ +akr+++++++ + lL +ll+gn lvn+ l++l++ ++ + l +a+
SwissProt::Q3TWN3 262 ISLLLCLSGMFSGLNLGLMALDPMELrivqNCGTEKEKNYAKRIEPVRRQGNYLLCSLLLGNVLVNTTLTILLDDIAGSGL--------VAV 345
568889********************77775555666689************************************99987........577 PP
CNNM 91 vivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslvees 171
v+ t+ i++fGEi+P++++ ++ +++ ++ +++++++ ++P+++++++l++++l ++e ++++ +e l +++++
SwissProt::Q3TWN3 346 VVSTIGIVIFGEIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDCVL-----GQEIGTVYNREKLLEMLRVT 421
777*****************************************************.....9***************9876 PP
Or compare SwissProt::Q3TWN3 to CDD or PaperBLAST