VIMSS10078452 has 499 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.3e-37 112.9 1.7 1.5e-36 111.9 1.7 1.5 1 VIMSS10078452
Domain annotation for each sequence (and alignments):
>> VIMSS10078452
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 111.9 1.7 1.5e-36 1.5e-36 2 180 .. 39 210 .. 38 211 .. 0.93
Alignments for each domain:
== domain 1 score: 111.9 bits; conditional E-value: 1.5e-36
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgn....kgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatviv 93
+a++l+l+++++s+++++l+sl ++le l+++g+ k+a+++l++++++++lL+tll++n ++ +l+++++++f ++a +++
VIMSS10078452 39 VACFLVLFAGIMSGLTLGLMSLGLVELEILQQSGSsaekKQAAAILPVVKKQHQLLVTLLLCNAAAMEALPICLDKIFHPFVA---------VLLS 125
579************************88888777666689999***********************************9996.........4555 PP
CNNM 94 tllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseee....Gvieee 180
++++l fGEi+P++++ ++ +++ + +++r+l+i++yP+++++++++++++ +++++ +++ +l++lv+++ +e G++ +e
VIMSS10078452 126 VTFVLAFGEIIPQAICSRYGLAVGANFLWLVRILMIICYPIAYPIGKVLDAVI------GHNDTLFRRAQLKALVSIHSQEagkgGELTHE 210
*****************************************************......9*******************997777777666 PP
Or compare VIMSS10078452 to CDD or PaperBLAST