VIMSS10082855 has 527 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-37 115.5 0.4 1.7e-37 114.9 0.4 1.2 1 VIMSS10082855
Domain annotation for each sequence (and alignments):
>> VIMSS10082855
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 114.9 0.4 1.7e-37 1.7e-37 2 174 .. 18 180 .. 17 191 .. 0.92
Alignments for each domain:
== domain 1 score: 114.9 bits; conditional E-value: 1.7e-37
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakr....llkllenperlLstlligntlvnillsalatalfaellaegalavviatviv 93
i+++l+++++++++++++l+sl ++le l ++g+++ + + ++++n++ lL tllign++++ +l++++++++ +la +++
VIMSS10082855 18 IIIALVAFAGLMAGLTLGLMSLGLVDLEVLIKSGRPQDRInagkIFPVVKNQHLLLCTLLIGNSMAMEALPIFLDKIVPPWLA----------ILL 103
789********************************766655555**************************************6..........555 PP
CNNM 94 .tllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseee 174
++lilvfGEi+P+++++++ +k+ ++ap++rvl +l++P++++++++++++l +k ++ +++ el+++v+ + +e
VIMSS10082855 104 sVTLILVFGEIMPQAVCTRYGLKVGAIMAPFVRVLLVLFFPISYPISKVLDWML-----GKGHGVLLRRAELKTFVNFHGNE 180
5*****************************************************.....9****************988766 PP
Or compare VIMSS10082855 to CDD or PaperBLAST