VIMSS10100907 has 494 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-37 115.0 0.6 2.7e-37 114.3 0.6 1.3 1 VIMSS10100907
Domain annotation for each sequence (and alignments):
>> VIMSS10100907
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 114.3 0.6 2.7e-37 2.7e-37 2 180 .. 41 212 .. 40 213 .. 0.94
Alignments for each domain:
== domain 1 score: 114.3 bits; conditional E-value: 2.7e-37
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgn....kgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatviv 93
i ++l+l+++++s+++++l+sl ++le l+++g+ k+a+++ ++++++++lL+tll++n +++ +l++++++lf+e++a +i+
VIMSS10100907 41 ISCFLVLFAGIMSGLTLGLMSLGLVELEILQRSGTpnekKQAAAIFPVVQKQHQLLVTLLLCNAMAMEGLPIYLDKLFNEYVA----------IIL 126
679************************99999999777788888*************************************96..........555 PP
CNNM 94 .tllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseee....Gvieee 180
++++l fGE++P+++++++ +++ +++++r+l++l+yP++++++++++l+l ++++ +++ +l++lv+++ +e G++ ++
VIMSS10100907 127 sVTFVLAFGEVIPQAICTRYGLAVGANFVWLVRILMTLCYPIAFPIGKILDLVL------GHNDALFRRAQLKALVSIHSQEagkgGELTHD 212
5*****************************************************......9******************9997776666655 PP
Or compare VIMSS10100907 to CDD or PaperBLAST