VIMSS10109758 has 500 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.4e-38 117.2 1.6 5.1e-38 116.6 1.6 1.2 1 VIMSS10109758
Domain annotation for each sequence (and alignments):
>> VIMSS10109758
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 116.6 1.6 5.1e-38 5.1e-38 1 178 [. 18 189 .. 18 192 .. 0.93
Alignments for each domain:
== domain 1 score: 116.6 bits; conditional E-value: 5.1e-38
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgn....kgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvi 92
l++++l+++++++s+++++l+sls ++le + ++g+ k+a+++l+l++n++ lL tllign l++ +l++++++l+ + a ++
VIMSS10109758 18 LVCVALVVFAGLMSGLTLGLMSLSIVELEVMIKAGEphdrKNAEKILPLVKNQHLLLCTLLIGNALAMEALPIFVDSLLPAWGA----------IL 103
57899******************************9888899999*************************************96..........55 PP
CNNM 93 v.tllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseee....Gvie 178
+ ++lil fGEi+P++++ ++ ++i +++ ++r+++i+++Pl++++++l++l+l +k++++ + + el+slv ++ +e G++
VIMSS10109758 104 IsVTLILAFGEIIPQAVCSRYGLSIGAKLSFLVRLIIIVFFPLSYPISKLLDLLL-----GKRHSTLLGRAELKSLVYMHGNEagkgGELT 189
55*****************************************************.....9****************99988866655555 PP
Or compare VIMSS10109758 to CDD or PaperBLAST