VIMSS11867 has 346 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.5e-49 152.7 2.7 8.5e-49 151.8 2.7 1.3 1 VIMSS11867
Domain annotation for each sequence (and alignments):
>> VIMSS11867
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 151.8 2.7 8.5e-49 8.5e-49 3 181 .] 8 179 .. 6 179 .. 0.97
Alignments for each domain:
== domain 1 score: 151.8 bits; conditional E-value: 8.5e-49
CNNM 3 allllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtllilvfG 101
++++ll s+++s+aE+Al+s+ +++++l++++n++a +l+ ++++ +r + t++++n++ ni+ s+ ++al++++l +++++ ++ +i+tlli+vfG
VIMSS11867 8 IFIVLLGSGICSCAEAALFSVPLVKVRQLSQSNNPSAIALQAIRHRMNRPIGTIVVLNNIFNIVGSITIGALATKHL--QDAWMGVFSGILTLLIIVFG 104
577789***********************************************************************..799***************** PP
CNNM 102 EilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieeee 181
Ei+Pktl+ ++a ial++a p+r+l ++++Plvwl+++++n ++ ++++ p + e e++ l +++++eGvie +e
VIMSS11867 105 EIIPKTLGERYATNIALLIAIPVRFLTLIFTPLVWLIEQITNPFT-----HGKRVPSTNEAEIKFLATLGYKEGVIEGDE 179
*********************************************.....**************************9776 PP
Or compare VIMSS11867 to CDD or PaperBLAST