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Align VIMSS125350 to PF01595 (DUF21)

VIMSS125350 has 434 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.9e-48  149.3   4.3    6.8e-48  148.8   4.3    1.2  1  VIMSS125350  


Domain annotation for each sequence (and alignments):
>> VIMSS125350  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  148.8   4.3   6.8e-48   6.8e-48       3     172 ..      18     193 ..      16     198 .. 0.95

  Alignments for each domain:
  == domain 1  score: 148.8 bits;  conditional E-value: 6.8e-48
        DUF21   3 ivlll.llsaffsgaEtAlvslsrlrleelaekgkkkakrllkllknperlLstlligntlvnillsalatalfvellaegalavviatvivtllilv 99 
                   v++l ++saffsg+EtAl+++sr+r+++l  +g+++a  + +l+++++rl+ tllign+lvnil+s+l+t+l++ l+  g+ +v+iatv++t+l+++
  VIMSS125350  18 SVICLlVISAFFSGSETALTAASRSRMHTLENNGEERAGMVTRLIERRDRLIGTLLIGNNLVNILASSLTTSLLIGLF--GDSGVAIATVAMTVLLVI 113
                  4555559***********************************************************************..689*************** PP

        DUF21 100 fgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil.......esesepavseeelkklveeseeegvi 172
                  f+E+lPks+a++ ++++ala+ap++r +  ++ P++ l++++++ il       +s+    +  eel+  v++ ++eg +
  VIMSS125350 114 FSEVLPKSWAIASPDRFALAVAPWVRPFVAVVGPISSLVNAIVRRILhlfginlSSDLPMLTAHEELRGAVNLLHREGSV 193
                  *****************************************************9999999999*********99999864 PP



Or compare VIMSS125350 to CDD or PaperBLAST