VIMSS1302089 has 422 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-47 147.8 10.0 2e-47 147.3 10.0 1.3 1 VIMSS1302089
Domain annotation for each sequence (and alignments):
>> VIMSS1302089
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 147.3 10.0 2e-47 2e-47 2 178 .. 3 178 .. 2 181 .. 0.96
Alignments for each domain:
== domain 1 score: 147.3 bits; conditional E-value: 2e-47
CNNM 2 iallll.llsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtlli 97
i+++l l+saffsaaEtA++s+s++ +++l+ +gn++ak + l+++ e ++stllignt++n+++s++ata ++ ll g+ ++v++tv vt+li
VIMSS1302089 3 IIVALSlLASAFFSAAETAFTSVSPSSIHKLVVSGNRRAKVVDALTARKELVISTLLIGNTVANVAASSVATAWLVGLL--GSEGLVVSTVTVTCLI 97
5566655************************************************************************..678************* PP
CNNM 98 lvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvie 178
l+f+E+lPkt+al+n+eki+l+++++++ + +ll+P++ ++++ ++++++lG+ +e+e + + +r l+ ++e++G++
VIMSS1302089 98 LLFSEVLPKTYALQNPEKISLRTSVIVHACFLLLSPIAVSIRYIVDFVVKILGMRGEREMISAVDAMRNLILLHESKGTMF 178
******************************************************99999999****************985 PP
Or compare VIMSS1302089 to CDD or PaperBLAST