VIMSS13615 has 424 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-29 89.4 6.9 1.8e-29 88.8 6.9 1.3 1 VIMSS13615
Domain annotation for each sequence (and alignments):
>> VIMSS13615
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 88.8 6.9 1.8e-29 1.8e-29 2 180 .. 15 190 .. 14 191 .. 0.90
Alignments for each domain:
== domain 1 score: 88.8 bits; conditional E-value: 1.8e-29
CNNM 2 iallll.llsaffsaaEtAlvslsklrleelaekgnkgakr....llkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtl 95
i ++ll ++sa++sa EtA++s++++++ + ++++nk+ k + ++ +n + L+t+l+ n++v il s ++ ++ + +++ a+++++ ++i +
VIMSS13615 15 ISIILLaCISAVVSAYETAITSITSYKWSNYVKTHNKQKKLttkiVNHFQKNYSACLITILVANNIVAILVSNILFLALDQSIKNPAISSALNLLISGV 113
5555665*********************87777777655554445999999*********************************999************ PP
CNNM 96 lilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieee 180
l+l + Ei+Pktla+ n ++ +++a+++++++il++P+++l + ++ + e++p v++ + +++e e++G + +e
VIMSS13615 114 LLLMLCEITPKTLARINIIRVLVYFAVVVYFFYILFWPITKLASIIFAK--------YEKAPPVSRRDVYFFIDEIEQNGLFTKE 190
******************************************8888765........5699***************999998665 PP
Or compare VIMSS13615 to CDD or PaperBLAST