VIMSS149990 has 398 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-50 156.2 2.2 5.3e-50 155.7 2.2 1.2 1 VIMSS149990
Domain annotation for each sequence (and alignments):
>> VIMSS149990
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 155.7 2.2 5.3e-50 5.3e-50 21 174 .. 1 154 [. 1 159 [. 0.97
Alignments for each domain:
== domain 1 score: 155.7 bits; conditional E-value: 5.3e-50
CNNM 21 vslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtllilvfGEilPktlalknaekial 118
++l+++rl+++a++gn++akr++kll++p+rl+s +lign+lvnil+sal+t + ++l+ g+++v+iat+++t+++lvf+E+lPkt+a+ ++ek+a
VIMSS149990 1 MTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLY--GDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAY 96
689********************************************************..79*********************************** PP
CNNM 119 avapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseee 174
++ +l l+il++Plvwlln +++l++rl+G+ + +++eelr++v es+++
VIMSS149990 97 PSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIktDIVVSGSLSKEELRTIVHESRSQ 154
*********************************877778999************9986 PP
Or compare VIMSS149990 to CDD or PaperBLAST