VIMSS158455 has 434 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.1e-57 178.5 6.2 7.1e-57 178.1 6.2 1.1 1 VIMSS158455
Domain annotation for each sequence (and alignments):
>> VIMSS158455
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 178.1 6.2 7.1e-57 7.1e-57 1 181 [] 8 202 .. 8 202 .. 0.98
Alignments for each domain:
== domain 1 score: 178.1 bits; conditional E-value: 7.1e-57
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae............galav 86
li++ll+++saff+a+E+A+v+++++rl++l ++++k+a + ++ ++++ +Ls++++g+t+ +++l++l++++++ +l++ + l++
VIMSS158455 8 LIIALLIAISAFFVATEFAIVKMRPSRLDQLIAEKDKRAVLARHIYNHLNAYLSACQLGITISSLGLGWLGESTVEAALHPlfslmelpqsaiTILSF 105
6889999**************************************************************************************999** PP
CNNM 87 viatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseeeGvieeee 181
+ia++++t+l++v+GE++Pktla+ + e++alava+pl++++++++P++w+ln +a +i rl+G +e+e a+te+el+ +v es+++G+i+++e
VIMSS158455 106 TIAFLFITFLHVVVGELVPKTLAIDKTETVALAVARPLHIFYKVMFPFIWILNGSAVFIARLFGLepASEHEIAHTEDELKIIVGESYKSGEINQSE 202
*********************************************************************************************9886 PP
Or compare VIMSS158455 to CDD or PaperBLAST