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Align VIMSS158959 to PF01595 (CNNM)

VIMSS158959 has 444 amino acids

Query:       CNNM  [M=181]
Accession:   PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      4e-53  165.9   5.6    6.5e-53  165.2   5.6    1.3  1  VIMSS158959  


Domain annotation for each sequence (and alignments):
>> VIMSS158959  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  165.2   5.6   6.5e-53   6.5e-53       1     181 []      15     204 ..      15     204 .. 0.97

  Alignments for each domain:
  == domain 1  score: 165.2 bits;  conditional E-value: 6.5e-53
         CNNM   1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae........galavviat 90 
                  +++++l  l+aff++aE+Alvsl+k+r++++ae+g+k+a  l kl+++p+++L+t+++g+tl+ +++sa a++ +a  l+         ++l+++++t
  VIMSS158959  15 ILIVVLTMLNAFFASAEMALVSLNKNRVKSQAETGDKKAVMLAKLVDDPSKFLATIQVGITLAGFFSSASAATSIATRLESvfggssfaKELSIIVVT 112
                  6789999**************************************************************8888888888788**************** PP

         CNNM  91 vivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv.kkeeepavteeelrslveeseeeGvieeee 181
                  +++++++lvfGE+ Pk+lal+++ekia ++++p+  + ++l+P+v++l+ +++++++l+++ k+ +++ +t+ee++ l+e +++ Gvie ee
  VIMSS158959 113 IVLSYITLVFGELYPKRLALQKSEKIARVSVRPIMAVGVVLRPFVKFLSFSTDILVKLTRMeKNTDNEKMTREEMQLLIETGRRDGVIEVEE 204
                  ****************************************************************************************9987 PP



Or compare VIMSS158959 to CDD or PaperBLAST