VIMSS170554 has 441 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-52 164.0 0.6 2e-52 163.5 0.6 1.2 1 VIMSS170554
Domain annotation for each sequence (and alignments):
>> VIMSS170554
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 163.5 0.6 2e-52 2e-52 2 181 .] 5 195 .. 4 195 .. 0.98
Alignments for each domain:
== domain 1 score: 163.5 bits; conditional E-value: 2e-52
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae...........galavvi 88
+++ l+l+saffsaaE+Al++ +++rl++la++g+++a r+l+l++ p ++ ++++ig++ v il++++++ ++++la + +a ++
VIMSS170554 5 VLVTLILVSAFFSAAEIALTASRRTRLQTLADDGDSRAPRILQLKDTPGNFFTVVQIGVNAVAILAGIIGERQISDTLAGwladwlpqaraDRVANLA 102
67899**********************************************************************999999999*******99999** PP
CNNM 89 atvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieeee 181
+vivt l+++f+++lPk+la+ ++e++ala+++p++ + ++l+P+vw++n a+lil+llGv +++ +++t e++ ++v +++e Gv+ + e
VIMSS170554 103 GFVIVTGLFILFADLLPKRLAVLYPERFALAIIGPMQGCLRVLRPVVWVFNGAADLILKLLGVPTQRVEQITTEDIAAMVGAGAEAGVLRKHE 195
****************************************************************************************98765 PP
Or compare VIMSS170554 to CDD or PaperBLAST