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Align VIMSS1748219 to PF01595 (DUF21)

VIMSS1748219 has 364 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-44  138.2   6.8    1.6e-44  137.8   6.8    1.1  1  VIMSS1748219  


Domain annotation for each sequence (and alignments):
>> VIMSS1748219  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.8   6.8   1.6e-44   1.6e-44       1     176 []       8     202 ..       8     202 .. 0.99

  Alignments for each domain:
  == domain 1  score: 137.8 bits;  conditional E-value: 1.6e-44
         DUF21   1 liivlllllsaffsgaEtAlvslsrlrleelaekgkkkakrllkllknperlLstlligntlvnillsalatalfvellae............gala 85 
                   l++vlll+++aff++aE+Al+s++r rl++lae+gkk+a ++ +  ++++ +L+  ++g+t+++ill+ ++++++++ll++            ++++
  VIMSS1748219   8 LLTVLLLAANAFFVAAEFALISARRDRLQALAEQGKKSAITVIRAGEHLSLMLAGSQLGITICSILLGRVGEPAVAHLLEKpfaligvsdtvlHTVS 104
                   6899***************************************************************************99**************** PP

         DUF21  86 vviatvivtllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil.......esesepavseeelkklveeseeegvieee 175
                   +v+a+++v++l++++gE++Pk++a++ +e+ a++l+pp  ++++  +P++++ ++++n+ l        +e ++avs  el ++++es +eg +++e
  VIMSS1748219 105 FVVALAVVVILHVLLGEMVPKNIAIAGPETAAMLLIPPYLLYIRAARPFIAFYNWCANATLrafgvepRDELASAVSTVELSEMIAESVSEGLLDTE 201
                   *******************************************************************9999***********************999 PP

         DUF21 176 e 176
                   e
  VIMSS1748219 202 E 202
                   7 PP



Or compare VIMSS1748219 to CDD or PaperBLAST