VIMSS1936808 has 428 amino acids
Query: CNNM [M=181] Accession: PF01595.24 Description: Cyclin M transmembrane N-terminal domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.4e-58 183.7 4.5 2e-58 183.1 4.5 1.1 1 VIMSS1936808 Domain annotation for each sequence (and alignments): >> VIMSS1936808 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 183.1 4.5 2e-58 2e-58 1 174 [. 11 184 .. 10 189 .. 0.97 Alignments for each domain: == domain 1 score: 183.1 bits; conditional E-value: 2e-58 CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtlli 97 +i+++++++sa fs++Et++++l+++rl+++a++gn++akr++kll++p+rl+s +lign+lvnil+sal+t + ++l+ g+++v+iat+++t+++ VIMSS1936808 11 IILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLY--GDAGVAIATGVLTFVV 105 5778888************************************************************************..79************** PP CNNM 98 lvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseee 174 lvf+E+lPkt+a+ ++ek+a ++ +l l+il++Plvwlln++++ ++r++G+ + +++eelr++v es+++ VIMSS1936808 106 LVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIktDIVVSGSLSKEELRTIVHESRSQ 184 ******************************************************877778999************9986 PP
Or compare VIMSS1936808 to CDD or PaperBLAST