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Align VIMSS1938021 to PF01595 (CNNM)

VIMSS1938021 has 434 amino acids

Query:       CNNM  [M=181]
Accession:   PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-34  105.6   1.1    1.7e-34  105.1   1.1    1.2  1  VIMSS1938021  


Domain annotation for each sequence (and alignments):
>> VIMSS1938021  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.1   1.1   1.7e-34   1.7e-34       3     181 .]       9     185 ..       7     185 .. 0.97

  Alignments for each domain:
  == domain 1  score: 105.1 bits;  conditional E-value: 1.7e-34
          CNNM   3 allllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtllilv 99 
                   a++l++++ + ++aE++l ++s++r ee +++g++g ++l ++ ++p+r+L++ l+ +  ++++++al+t +  + +  +  a++ia+++++ll  v
  VIMSS1938021   9 AVALVVVAWLAACAEAGLARVSSFRAEEAVRSGRRGGEKLAQVAADPTRYLNVALLVRVACEMAAAALVTYACLRQFDGTGEALIIAIAVMVLLSYV 105
                   68999************************************************************************99999*************** PP

          CNNM 100 fGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieeee 181
                      + P+t+++++++ +a a a++l  l +++ P+  ll l+ n+++   G + +++p+++e elr+lv+ +e+e  ie+ee
  VIMSS1938021 106 AVGVSPRTIGRQHPLNTATAAAYVLLPLARIMGPIPSLLILIGNALT--PGKGFRRGPFASEAELRALVDYAEKESLIEAEE 185
                   ***********************************************..45599*********************9999987 PP



Or compare VIMSS1938021 to CDD or PaperBLAST