VIMSS19901 has 449 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.7e-58 181.6 5.8 8.3e-58 181.1 5.8 1.2 1 VIMSS19901
Domain annotation for each sequence (and alignments):
>> VIMSS19901
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 181.1 5.8 8.3e-58 8.3e-58 2 180 .. 20 213 .. 19 214 .. 0.98
Alignments for each domain:
== domain 1 score: 181.1 bits; conditional E-value: 8.3e-58
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae..............galav 86
+a+ll+ll+aff+ +E+Alv+++k+rleel++ gn++ak +lk+ ++++++Ls++++g+tl +++l++++++++a+lla ++++v
VIMSS19901 20 VAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSLALGWVGEPAIAKLLAAlfesmdlrenpifiHSMSV 118
679999*************************************************************************9******************* PP
CNNM 87 viatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv.kkeeepavteeelrslveeseeeGvieee 180
via++ +t+l++v+GEi+Pk+la++++ek l+ a+pl+v+ +++yP+v+l++++a ++l+ +G+ ke++ +++eeel+ +v es +eG+i++
VIMSS19901 119 VIAFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGInPKEHDGTHSEEELKIIVGESLREGIIDSV 213
********************************************************************************************975 PP
Or compare VIMSS19901 to CDD or PaperBLAST